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Mpath maps multi-branching single-cell trajectories revealing progenitor cell progression during development

Authors :
Jinmiao Chen
Andreas Schlitzer
Svetoslav Chakarov
Florent Ginhoux
Michael Poidinger
Source :
Nature Communications, Vol 7, Iss 1, Pp 1-15 (2016)
Publication Year :
2016
Publisher :
Nature Portfolio, 2016.

Abstract

The tools for constructing cell lineages from single cell data are limited. Here, the authors present Mpath: an algorithm to derive multi-branching trajectories using neighbourhood-based cell state transitions, and use this to predict developmental trajectories in dendritic and muscle cells.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
7
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.42a9a97c4479cb291f76d450c86e4
Document Type :
article
Full Text :
https://doi.org/10.1038/ncomms11988