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The complete choloroplast genome of Carrierea calycina

Authors :
Shiyu Ying
Deyan Wang
Mengmeng Li
Huanhuan Liu
Source :
Mitochondrial DNA. Part B. Resources, Vol 4, Iss 1, Pp 1061-1062 (2019)
Publication Year :
2019
Publisher :
Taylor & Francis Group, 2019.

Abstract

The whole chloroplast (cp) genome sequence of Carrierea calycina has been characterized using Illumina pair-end sequencing. The complete cp genome was 158,085 bp in length, containing a large single copy region (LSC) of 84,663 bp, and a small single copy region (SSC) of 17,570 bp, which were separated by a pair of 27,926 bp inverted repeat regions (IRs). The genome contained 129 genes, including 85 protein-coding genes, 36 tRNA genes, and eight rRNA genes. The overall GC content of C. calycina cp genome is 36.8%, whereas the corresponding values of the LSC, SSC, and IR regions are 34.8%, 30.3%, and 41.8%, respectively. Further, phylogenetic analysis suggested that the location of C. calycina is out of the Idesia polycarpa and it is an outgroup to the genera of Salix and Populus.

Details

Language :
English
ISSN :
23802359
Volume :
4
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.3ac5d6adbf87441d982d4393fc3bb13d
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2019.1586466