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Deep Learning Radiographic Assessment of Pulmonary Edema: Optimizing Clinical Performance, Training With Serum Biomarkers

Authors :
Justin Huynh
Samira Masoudi
Abraham Noorbakhsh
Amin Mahmoodi
Seth Kligerman
Andrew Yen
Kathleen Jacobs
Lewis Hahn
Kyle Hasenstab
Michael Pazzani
Albert Hsiao
Source :
IEEE Access, Vol 10, Pp 48577-48588 (2022)
Publication Year :
2022
Publisher :
IEEE, 2022.

Abstract

A major obstacle when developing convolutional neural networks (CNNs) for medical imaging is the acquisition of training labels: Most current approaches rely on manual class labels from physicians, which may be challenging to obtain. Clinical biomarkers, often measured alongside medical images and used in diagnostic workup, may provide a rich set of data that can be collected retrospectively and utilized to train diagnostic models. In this work, we focused on assessing the potential of blood serum biomarkers, B-type natriuretic peptide (BNP) and NT-pro B-type natriuretic peptide (BNPP), indicative of acute heart failure (HF) and cardiogenic pulmonary edema to be used as continuously valued labels for training a radiographic deep learning algorithm. For this purpose, a CNN was trained using 27748 radiographs to automatically infer BNP and BNPP, and achieved strong performance (AUC =0.903, sensitivity =0.926, specificity =0.857, $r=0.787$ ). Also, the trained models achieved strong performance (AUC =0.801) for pulmonary edema detection when evaluated with radiologist labels. Since relevant radiographic features visible to the CNN may vary greatly based on image resolution, we also assessed the impact of image resolution on model learning and performance, comparing CNNs trained at five image sizes ( $64\times 64$ to $1024\times 1024$ ). Increasing image resolutions had diminishing but positive gains in AUC. Perhaps more importantly, experiments using three activation mapping techniques (saliency, Grad-CAM, XRAI) revealed considerably increased attention in the lungs with larger image sizes. This result emphasizes the need to utilize radiographs near native resolution for optimal CNN performance, which may not be fully captured by summary metrics like AUC.

Details

Language :
English
ISSN :
21693536
Volume :
10
Database :
Directory of Open Access Journals
Journal :
IEEE Access
Publication Type :
Academic Journal
Accession number :
edsdoj.2e89694ec11240348c75a0f7e853a24b
Document Type :
article
Full Text :
https://doi.org/10.1109/ACCESS.2022.3172706