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Comparison of DNA sequencing and morphological identification techniques to characterize environmental fungal communities

Authors :
Naohide Shinohara
Cheolwoon Woo
Naomichi Yamamoto
Kazuhiro Hashimoto
Hiroko Yoshida-Ohuchi
Yuji Kawakami
Source :
Scientific Reports, Vol 11, Iss 1, Pp 1-8 (2021)
Publication Year :
2021
Publisher :
Nature Portfolio, 2021.

Abstract

Abstract Culture-independent DNA sequencing of fungal internal transcribed spacer 2 (ITS2) region was compared to a culture-dependent morphological identification technique to characterize house dust-borne fungal communities. The abundant genera were Aspergillus, Wallemia, Cladosporium, and Penicillium. Statistically significant between-method correlations were observed for Wallemia and Cladosporium (Spearman’s ρ = 0.75 and 0.72, respectively; p

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
20452322
Volume :
11
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
edsdoj.2d4024f820344429d3ecf2af9b62a40
Document Type :
article
Full Text :
https://doi.org/10.1038/s41598-021-81996-w