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Influence of genetic variation on plasma protein levels in older adults using a multi-analyte panel.

Authors :
Sungeun Kim
Shanker Swaminathan
Mark Inlow
Shannon L Risacher
Kwangsik Nho
Li Shen
Tatiana M Foroud
Ronald C Petersen
Paul S Aisen
Holly Soares
Jon B Toledo
Leslie M Shaw
John Q Trojanowski
Michael W Weiner
Brenna C McDonald
Martin R Farlow
Bernardino Ghetti
Andrew J Saykin
Alzheimer’s Disease Neuroimaging Initiative (ADNI)
Source :
PLoS ONE, Vol 8, Iss 7, p e70269 (2013)
Publication Year :
2013
Publisher :
Public Library of Science (PLoS), 2013.

Abstract

Proteins, widely studied as potential biomarkers, play important roles in numerous physiological functions and diseases. Genetic variation may modulate corresponding protein levels and point to the role of these variants in disease pathophysiology. Effects of individual single nucleotide polymorphisms (SNPs) within a gene were analyzed for corresponding plasma protein levels using genome-wide association study (GWAS) genotype data and proteomic panel data with 132 quality-controlled analytes from 521 Caucasian participants in the Alzheimer's Disease Neuroimaging Initiative (ADNI) cohort. Linear regression analysis detected 112 significant (Bonferroni threshold p=2.44×10(-5)) associations between 27 analytes and 112 SNPs. 107 out of these 112 associations were tested in the Indiana Memory and Aging Study (IMAS) cohort for replication and 50 associations were replicated at uncorrected p

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
19326203
Volume :
8
Issue :
7
Database :
Directory of Open Access Journals
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
edsdoj.2c28cd2aca714081832418d4236d540b
Document Type :
article
Full Text :
https://doi.org/10.1371/journal.pone.0070269