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Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 loci.

Authors :
Claire L Simpson
Robert Wojciechowski
Konrad Oexle
Federico Murgia
Laura Portas
Xiaohui Li
Virginie J M Verhoeven
Veronique Vitart
Maria Schache
S Mohsen Hosseini
Pirro G Hysi
Leslie J Raffel
Mary Frances Cotch
Emily Chew
Barbara E K Klein
Ronald Klein
Tien Yin Wong
Cornelia M van Duijn
Paul Mitchell
Seang Mei Saw
Maurizio Fossarello
Jie Jin Wang
DCCT/EDIC Research Group
Ozren Polašek
Harry Campbell
Igor Rudan
Ben A Oostra
André G Uitterlinden
Albert Hofman
Fernando Rivadeneira
Najaf Amin
Lennart C Karssen
Johannes R Vingerling
Angela Döring
Thomas Bettecken
Goran Bencic
Christian Gieger
H-Erich Wichmann
James F Wilson
Cristina Venturini
Brian Fleck
Phillippa M Cumberland
Jugnoo S Rahi
Chris J Hammond
Caroline Hayward
Alan F Wright
Andrew D Paterson
Paul N Baird
Caroline C W Klaver
Jerome I Rotter
Mario Pirastu
Thomas Meitinger
Joan E Bailey-Wilson
Dwight Stambolian
Source :
PLoS ONE, Vol 9, Iss 9, p e107110 (2014)
Publication Year :
2014
Publisher :
Public Library of Science (PLoS), 2014.

Abstract

Refractive error (RE) is a complex, multifactorial disorder characterized by a mismatch between the optical power of the eye and its axial length that causes object images to be focused off the retina. The two major subtypes of RE are myopia (nearsightedness) and hyperopia (farsightedness), which represent opposite ends of the distribution of the quantitative measure of spherical refraction. We performed a fixed effects meta-analysis of genome-wide association results of myopia and hyperopia from 9 studies of European-derived populations: AREDS, KORA, FES, OGP-Talana, MESA, RSI, RSII, RSIII and ERF. One genome-wide significant region was observed for myopia, corresponding to a previously identified myopia locus on 8q12 (p = 1.25×10(-8)), which has been reported by Kiefer et al. as significantly associated with myopia age at onset and Verhoeven et al. as significantly associated to mean spherical-equivalent (MSE) refractive error. We observed two genome-wide significant associations with hyperopia. These regions overlapped with loci on 15q14 (minimum p value = 9.11×10(-11)) and 8q12 (minimum p value 1.82×10(-11)) previously reported for MSE and myopia age at onset. We also used an intermarker linkage- disequilibrium-based method for calculating the effective number of tests in targeted regional replication analyses. We analyzed myopia (which represents the closest phenotype in our data to the one used by Kiefer et al.) and showed replication of 10 additional loci associated with myopia previously reported by Kiefer et al. This is the first replication of these loci using myopia as the trait under analysis. "Replication-level" association was also seen between hyperopia and 12 of Kiefer et al.'s published loci. For the loci that show evidence of association to both myopia and hyperopia, the estimated effect of the risk alleles were in opposite directions for the two traits. This suggests that these loci are important contributors to variation of refractive error across the distribution.

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
19326203
Volume :
9
Issue :
9
Database :
Directory of Open Access Journals
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
edsdoj.2203e6a3cdb8432caf8445d80c0c2ecc
Document Type :
article
Full Text :
https://doi.org/10.1371/journal.pone.0107110