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Prognostic and metabolic characteristics of a novel cuproptosis-related signature in patients with hepatocellular carcinoma

Authors :
Xin Qu
Ling-cui Meng
Xi Lu
Xian Chen
Yong Li
Rui Zhou
Yan-juan Zhu
Yi-chang Luo
Jin-tao Huang
Xiao-liang Shi
Hai-Bo Zhang
Source :
Heliyon, Vol 10, Iss 1, Pp e23686- (2024)
Publication Year :
2024
Publisher :
Elsevier, 2024.

Abstract

Cuproptosis is a novel discovered mode of programmed cell death. To identify the molecular regulatory patterns related to cuproptosis, this study was designed for exploring the correlation between cuproptosis-related genes (CRGs) and the prognosis, metabolism, and treatment of hepatocellular carcinoma (HCC). Cancer Genome Atlas (TCGA) database was used to screen 363 HCC samples, which were categorized into 2 clusters based on the expression of CRGs. Survival analysis demonstrated that overall survival (OS) was better in Cluster 1 than Cluster 2 which might to be relevant to differences in metabolic based on functional analysis. With LASSO regression analysis and univariate COX regression, 8 prognosis-related genes were screened, a differently expressed genes (DEGs) were then constructed (HCC patients' DEGs)-based signature. The signature's stability was also validated in the 2 independent cohorts and test cohorts (GSE14520, HCC dataset in PCAWG). The 1-year, 3-year, and 5-year area under the curve (AUC) were 0.756, 0.706, and 0.722, respectively. The signature could also well predict the response to chemotherapy, targeted and transcatheter arterial chemoembolization (TACE) by providing a risk score. Moreover, the correlation was uncovered by the research between the metabolism and risk score. In conclusion, a unique cuproptosis-related signature that be capable of predicting patients' prognosis with HCC, and offered valuable insights into chemotherapy, TACE and targeted therapies for these patients has been developed.

Details

Language :
English
ISSN :
24058440
Volume :
10
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Heliyon
Publication Type :
Academic Journal
Accession number :
edsdoj.202a14a4c4cb4b529dce447d4706dae1
Document Type :
article
Full Text :
https://doi.org/10.1016/j.heliyon.2023.e23686