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Integrative bioinformatics analysis of WDHD1: a potential biomarker for pan-cancer prognosis, diagnosis, and immunotherapy

Authors :
Zhiwei Cui
Fan Zou
Rongli Wang
Lijun Wang
Feiyan Cheng
Lihui Wang
Rumeng Pan
Xin Guan
Nini Zheng
Wei Wang
Source :
World Journal of Surgical Oncology, Vol 21, Iss 1, Pp 1-28 (2023)
Publication Year :
2023
Publisher :
BMC, 2023.

Abstract

Abstract Background Although WD repeat and high-mobility group box DNA binding protein 1 (WDHD1) played an essential role in DNA replication, chromosome stability, and DNA damage repair, the panoramic picture of WDHD1 in human tumors remains unclear. Hence, this study aims to comprehensively characterize WDHD1 across 33 human cancers. Methods Based on publicly available databases such as TCGA, GTEx, and HPA, we used a bioinformatics approach to systematically explore the genomic features and biological functions of WDHD1 in pan-cancer. Results WDHD1 mRNA levels were significantly increased in more than 20 types of tumor tissues. Elevated WDHD1 expression was associated with significantly shorter overall survival (OS) in 10 tumors. Furthermore, in uterine corpus endometrial carcinoma (UCEC) and liver hepatocellular carcinoma (LIHC), WDHD1 expression was significantly associated with higher histological grades and pathological stages. In addition, WDHD1 had a high diagnostic value among 16 tumors (area under the ROC curve [AUC] > 0.9). Functional enrichment analyses suggested that WDHD1 probably participated in many oncogenic pathways such as E2F and MYC targets (false discovery rate [FDR]

Details

Language :
English
ISSN :
14777819
Volume :
21
Issue :
1
Database :
Directory of Open Access Journals
Journal :
World Journal of Surgical Oncology
Publication Type :
Academic Journal
Accession number :
edsdoj.1ef76be6f2324bfcb9146318a462d7cb
Document Type :
article
Full Text :
https://doi.org/10.1186/s12957-023-03187-3