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The 3D enhancer network of the developing T cell genome is shaped by SATB1

Authors :
Tomas Zelenka
Antonios Klonizakis
Despina Tsoukatou
Dionysios-Alexandros Papamatheakis
Sören Franzenburg
Petros Tzerpos
Ioannis-Rafail Tzonevrakis
George Papadogkonas
Manouela Kapsetaki
Christoforos Nikolaou
Dariusz Plewczynski
Charalampos Spilianakis
Source :
Nature Communications, Vol 13, Iss 1, Pp 1-22 (2022)
Publication Year :
2022
Publisher :
Nature Portfolio, 2022.

Abstract

Here the authors analyze the 3D genome structure of murine thymocytes and show that SATB1, a predominantly T-cell specific protein, helps to establish a regulatory, finer-scale organizational layer built upon a pre-existing chromatin scaffold mediated by other architectural proteins, such as CTCF.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
13
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.1dc5695c0aad49b8a43c996c128bfffc
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-022-34345-y