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Pyroptosis-related lncRNAs are potential biomarkers for predicting prognoses and immune responses in patients with UCEC

Authors :
Jinhui Liu
Rui Geng
Senmiao Ni
Lixin Cai
Sheng Yang
Fang Shao
Jianling Bai
Source :
Molecular Therapy: Nucleic Acids, Vol 27, Iss , Pp 1036-1055 (2022)
Publication Year :
2022
Publisher :
Elsevier, 2022.

Abstract

Uterine corpus endometrial carcinoma (UCEC) is a malignant disease globally, and there is no unified prognostic signature at present. In our study, two clusters were identified. Cluster 1 showed better prognosis and higher infiltration level, such as tumor microenvironment (TME), tumor mutation burden (TMB), and immune checkpoint genes expression. Gene set enrichment analysis (GSEA) indicated that some tumor-related pathways and immune-associated pathways were exposed. What is more, six pyroptosis-related long noncoding RNAs (lncRNAs) (PRLs) were applied to establish a prognostic signature through multiple Cox regression analysis. In both training and testing sets, patients with higher risk score had poorer survival than patients with low risk. The area under the curve (AUC) of receiver operating characteristic (ROC) curves performed that the survival probability was better in people with lower risk score. Mechanism analysis revealed that high risk score was correlated with reduced immune infiltration and T cells exhaustion, matching the definition of an “immune-desert” phenotype. Patients with lower risk score were characterized by higher immune checkpoint gene expression and TMB and have a sensitive response to immunotherapy and chemotherapy compared with patients with high risk score. The signature has accurate prediction ability of UCEC and is a promising therapeutic target to improve the effect of immunotherapy.

Details

Language :
English
ISSN :
21622531
Volume :
27
Issue :
1036-1055
Database :
Directory of Open Access Journals
Journal :
Molecular Therapy: Nucleic Acids
Publication Type :
Academic Journal
Accession number :
edsdoj.1cd2f30ba9c64ccb8fa6c70a08c4f62c
Document Type :
article
Full Text :
https://doi.org/10.1016/j.omtn.2022.01.018