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TAG‐SPARK: Empowering High‐Speed Volumetric Imaging With Deep Learning and Spatial Redundancy

Authors :
Yin‐Tzu Hsieh
Kai‐Chun Jhan
Jye‐Chang Lee
Guan‐Jie Huang
Chang‐Ling Chung
Wun‐Ci Chen
Ting‐Chen Chang
Bi‐Chang Chen
Ming‐Kai Pan
Shun‐Chi Wu
Shi‐Wei Chu
Source :
Advanced Science, Vol 11, Iss 41, Pp n/a-n/a (2024)
Publication Year :
2024
Publisher :
Wiley, 2024.

Abstract

Abstract Two‐photon high‐speed fluorescence calcium imaging stands as a mainstream technique in neuroscience for capturing neural activities with high spatiotemporal resolution. However, challenges arise from the inherent tradeoff between acquisition speed and image quality, grappling with a low signal‐to‐noise ratio (SNR) due to limited signal photon flux. Here, a contrast‐enhanced video‐rate volumetric system, integrating a tunable acoustic gradient (TAG) lens‐based high‐speed microscopy with a TAG‐SPARK denoising algorithm is demonstrated. The former facilitates high‐speed dense z‐sampling at sub‐micrometer‐scale intervals, allowing the latter to exploit the spatial redundancy of z‐slices for self‐supervised model training. This spatial redundancy‐based approach, tailored for 4D (xyzt) dataset, not only achieves >700% SNR enhancement but also retains fast‐spiking functional profiles of neuronal activities. High‐speed plus high‐quality images are exemplified by in vivo Purkinje cells calcium observation, revealing intriguing dendritic‐to‐somatic signal convolution, i.e., similar dendritic signals lead to reverse somatic responses. This tailored technique allows for capturing neuronal activities with high SNR, thus advancing the fundamental comprehension of neuronal transduction pathways within 3D neuronal architecture.

Details

Language :
English
ISSN :
21983844
Volume :
11
Issue :
41
Database :
Directory of Open Access Journals
Journal :
Advanced Science
Publication Type :
Academic Journal
Accession number :
edsdoj.160eb086e1645ed9bef1b099be3df2f
Document Type :
article
Full Text :
https://doi.org/10.1002/advs.202405293