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MBECS: Microbiome Batch Effects Correction Suite

Authors :
Michael Olbrich
Axel Künstner
Hauke Busch
Source :
BMC Bioinformatics, Vol 24, Iss 1, Pp 1-5 (2023)
Publication Year :
2023
Publisher :
BMC, 2023.

Abstract

Abstract Despite the availability of batch effect correcting algorithms (BECA), no comprehensive tool that combines batch correction and evaluation of the results exists for microbiome datasets. This work outlines the Microbiome Batch Effects Correction Suite development that integrates several BECAs and evaluation metrics into a software package for the statistical computation framework R.

Details

Language :
English
ISSN :
14712105
Volume :
24
Issue :
1
Database :
Directory of Open Access Journals
Journal :
BMC Bioinformatics
Publication Type :
Academic Journal
Accession number :
edsdoj.1593e25066c24f1db831c55a64785d80
Document Type :
article
Full Text :
https://doi.org/10.1186/s12859-023-05252-w