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Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny

Authors :
Elif Yılmaz
David G. Mann
Romain Gastineau
Rosa Trobajo
Cüneyt Nadir Solak
Ewa Górecka
Monique Turmel
Claude Lemieux
Nesil Ertorun
Andrzej Witkowski
Source :
PhytoKeys, Vol 241, Iss , Pp 27-48 (2024)
Publication Year :
2024
Publisher :
Pensoft Publishers, 2024.

Abstract

The current article describes Navicula vanseea sp. nov., a new species of diatom from Lake Van, a highly alkaline lake in Eastern Anatolia (Türkiye). The description is based on light and scanning electron microscopy performed on two monoclonal cultures. The complete nuclear rRNA clusters and plastid genomes have been sequenced for these two strains and the complete mitogenome for one of them. The plastome of both strains shows the probable loss of a functional ycf35 gene. They also exhibit two IB4 group I introns in their rrl, each encoding for a putative LAGLIDADG homing endonuclease, with the first L1917 IB4 intron reported amongst diatoms. The Maximum Likelihood phylogeny inferred from a concatenated alignment of 18S, rbcL and psbC distinguishes N. vanseea sp. nov. from the morphologically similar species Navicula cincta and Navicula microdigitoradiata.

Subjects

Subjects :
Botany
QK1-989

Details

Language :
English
ISSN :
13142003
Volume :
241
Issue :
27-48
Database :
Directory of Open Access Journals
Journal :
PhytoKeys
Publication Type :
Academic Journal
Accession number :
edsdoj.1306b10cbdd4c7a9f39abe55208192d
Document Type :
article
Full Text :
https://doi.org/10.3897/phytokeys.241.118903