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Increased runs of homozygosity in the autosomal genome of Brazilian individuals with neurodevelopmental delay/intellectual disability and/or multiple congenital anomalies investigated by chromosomal microarray analysis

Authors :
Gabriela Roldão Correia-Costa
Ilária Cristina Sgardioli
Ana Paula dos Santos
Tânia Kawasaki de Araujo
Rodrigo Secolin
Iscia Lopes-Cendes
Vera Lúcia Gil-da-Silva-Lopes
Társis Paiva Vieira
Source :
Genetics and Molecular Biology, Vol 45, Iss 1 (2022)
Publication Year :
2022
Publisher :
Sociedade Brasileira de Genética, 2022.

Abstract

Abstract Runs of homozygosity (ROH) in the human genome may be clinically relevant. The aim of this study was to report the frequency of increased ROH of the autosomal genome in individuals with neurodevelopmental delay/intellectual disability and/or multiple congenital anomalies, and to compare these data with a control group. Data consisted of calls of homozygosity from 265 patients and 289 controls. In total, 7.2% (19/265) of the patients showed multiple ROH exceeding 1% of autosomal genome, compared to 1.4% (4/289) in the control group (p=0.0006). Homozygosity ranged from 1.38% to 22.12% among patients, and from 1.53 to 2.40% in the control group. In turn, 1.9% (5/265) of patients presented ROH ≥10Mb in a single chromosome, compared to 0.3% (1/289) of individuals from the control group (p=0.0801). By excluding cases with reported consanguineous parents (15/24), the frequency of increased ROH was 3.4% (9/250) among patients and 1.7% (5/289) in the control group, considering multiple ROH exceeding 1% of the autosome genome and ROH ≥10Mb in a single chromosome together, although not statistically significant (p=0.1873). These results reinforce the importance of investigating ROH, which with complementary diagnostic tests can improve the diagnostic yield for patients with such conditions.

Details

Language :
English
ISSN :
16784685
Volume :
45
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Genetics and Molecular Biology
Publication Type :
Academic Journal
Accession number :
edsdoj.11f96c4871f545bfb0c2c8e28ae860d1
Document Type :
article
Full Text :
https://doi.org/10.1590/1678-4685-gmb-2020-0480