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Genome wide association analysis of a founder population identified TAF3 as a gene for MCHC in humans.

Authors :
Giorgio Pistis
Shawntel U Okonkwo
Michela Traglia
Cinzia Sala
So-Youn Shin
Corrado Masciullo
Iwan Buetti
Roberto Massacane
Massimo Mangino
Swee-Lay Thein
Timothy D Spector
Santhi Ganesh
CHARGE Consortium Hematology Working
Nicola Pirastu
Paolo Gasparini
Nicole Soranzo
Clara Camaschella
Daniel Hart
Michael R Green
Daniela Toniolo
Source :
PLoS ONE, Vol 8, Iss 7, p e69206 (2013)
Publication Year :
2013
Publisher :
Public Library of Science (PLoS), 2013.

Abstract

The red blood cell related traits are highly heritable but their genetics are poorly defined. Only 5-10% of the total observed variance is explained by the genetic loci found to date, suggesting that additional loci should be searched using approaches alternative to large meta analysis. GWAS (Genome Wide Association Study) for red blood cell traits in a founder population cohort from Northern Italy identified a new locus for mean corpuscular hemoglobin concentration (MCHC) in the TAF3 gene. The association was replicated in two cohorts (rs1887582, P = 4.25E-09). TAF3 encodes a transcription cofactor that participates in core promoter recognition complex, and is involved in zebrafish and mouse erythropoiesis. We show here that TAF3 is required for transcription of the SPTA1 gene, encoding alpha spectrin, one of the proteins that link the plasma membrane to the actin cytoskeleton. Mutations in SPTA1 are responsible for hereditary spherocytosis, a monogenic disorder of MCHC, as well as for the normal MCHC level. Based on our results, we propose that TAF3 is required for normal erythropoiesis in human and that it might have a role in controlling the ratio between hemoglobin (Hb) and cell volume and in the dynamics of RBC maturation in healthy individuals. Finally, TAF3 represents a potential candidate or a modifier gene for disorders of red cell membrane.

Subjects

Subjects :
Medicine
Science

Details

Language :
English
ISSN :
19326203
Volume :
8
Issue :
7
Database :
Directory of Open Access Journals
Journal :
PLoS ONE
Publication Type :
Academic Journal
Accession number :
edsdoj.10f20b756ddf47168cadb980f6421b74
Document Type :
article
Full Text :
https://doi.org/10.1371/journal.pone.0069206