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An approach for open multivariate analysis of integrated clinical and environmental exposures data

Authors :
Karamarie Fecho
Perry Haaland
Ashok Krishnamurthy
Bo Lan
Stephen A. Ramsey
Patrick L. Schmitt
Priya Sharma
Meghamala Sinha
Hao Xu
Source :
Informatics in Medicine Unlocked, Vol 26, Iss , Pp 100733- (2021)
Publication Year :
2021
Publisher :
Elsevier, 2021.

Abstract

The Integrated Clinical and Environmental Exposures Service (ICEES) provides regulatory-compliant open access to sensitive patient data that have been integrated with public exposures data. ICEES was designed initially to support dynamic cohort creation and bivariate contingency tests. The objective of the present study was to develop an open approach to support multivariate analyses using existing ICEES functionalities and abiding by all regulatory constraints. We first developed an open approach for generating a multivariate table that maintains contingencies between clinical and environmental variables using programmatic calls to the open ICEES application programming interface. We then applied the approach to data on a large cohort (N = 22,365) of patients with asthma or related conditions and generated an eight-feature table. Due to regulatory constraints, data loss was incurred with the incorporation of each successive feature variable, from a starting sample size of N = 22,365 to a final sample size of N = 4,556 (20.4%), but data loss was < 10% until the addition of the final two feature variables. We then applied a generalized linear model to the subsequent dataset and focused on the impact of seven select feature variables on asthma exacerbations, defined as annual emergency department or inpatient visits for respiratory issues. We identified five feature variables—sex, race, obesity, prednisone, and airborne particulate exposure—as significant predictors of asthma exacerbations. We discuss the advantages and disadvantages of ICEES open multivariate analysis and conclude that, despite limitations, ICEES can provide a valuable resource for open multivariate analysis and can serve as an exemplar for regulatory-compliant informatic solutions to open patient data, with capabilities to explore the impact of environmental exposures on health outcomes.

Details

Language :
English
ISSN :
23529148
Volume :
26
Issue :
100733-
Database :
Directory of Open Access Journals
Journal :
Informatics in Medicine Unlocked
Publication Type :
Academic Journal
Accession number :
edsdoj.0f6b1e9e16d24a9886b69364730fdacf
Document Type :
article
Full Text :
https://doi.org/10.1016/j.imu.2021.100733