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Characterization of the complete mitochondrial genome of Golden cusk, Sirembo imberbis (Ophidiiformes:Ophidiidae)

Authors :
Nazia Tabassum
Yeonghye Kim
Hyun-Woo Kim
Source :
Mitochondrial DNA. Part B. Resources, Vol 5, Iss 4, Pp 3815-3816 (2020)
Publication Year :
2020
Publisher :
Taylor & Francis Group, 2020.

Abstract

The complete mitochondrial genome of Sirembo imberbis was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. Total length of the mitogenome was 16,717 bp, which harbors the conserved 13 protein-coding genes (PCGs), 2 ribosomal RNAs (12S and 16S), 22 tRNAs, and two non-coding region (the control region and the origin of light-strand replication). Among 13 protein-coding genes, unusual start codon (GTG) was exclusively identified in COX1, while the incomplete stop codons (TA- or T–) were detected in COX2, COX3, ND2, ND3, ND4 and CytB. As a result of phylogenetic tree, S. imberbis formed a cluster of the family Ophidiidae together with Bassozetus zenkevitchi and Lamprogrammus niger.

Details

Language :
English
ISSN :
23802359
Volume :
5
Issue :
4
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.0e0789ef6b6e4637ad22568f37a6ca67
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2020.1840942