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Genome-wide mutational signatures in low-coverage whole genome sequencing of cell-free DNA

Authors :
Jonathan C. M. Wan
Dennis Stephens
Lingqi Luo
James R. White
Caitlin M. Stewart
Benoît Rousseau
Dana W. Y. Tsui
Luis A. Diaz
Source :
Nature Communications, Vol 13, Iss 1, Pp 1-12 (2022)
Publication Year :
2022
Publisher :
Nature Portfolio, 2022.

Abstract

Detection of mutational signatures in cell-free DNA (cfDNA) is challenging due to low sequence coverage and low mutant allele fractions. Here, the authors identify mutational signatures in plasma whole genome sequencing of cancer patients and use machine learning to distinguish them from healthy individuals.

Subjects

Subjects :
Science

Details

Language :
English
ISSN :
20411723
Volume :
13
Issue :
1
Database :
Directory of Open Access Journals
Journal :
Nature Communications
Publication Type :
Academic Journal
Accession number :
edsdoj.0be4d40d73634081ab710d857edeeeba
Document Type :
article
Full Text :
https://doi.org/10.1038/s41467-022-32598-1