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Draft genome sequencing data of the bacterial wilt, Ralstonia pseudosolanacearum T2C-Rasto, from Cucumis sativus, in An Giang province, Mekong Delta - Southwest Vietnam

Authors :
Thanh Binh Le
Minh Ngoc Truong
Ba Tho Nguyen
Dinh Quang Vo
Trang Thi Phuong Phan
Source :
Data in Brief, Vol 48, Iss , Pp 109252- (2023)
Publication Year :
2023
Publisher :
Elsevier, 2023.

Abstract

Ralstonia solanacearum is one of the major plant pathogens causing bacterial wilt disease in a variety of plant species. In Vietnam, according to our knowledge, we first discovered R. pseudosolanacearum, which is one of four phylotypes of R. solanacearum, as a causal agent wilting in cucumber (Cucumis sativus). Due to the latent infection of R. pseudosolanacearum and its heterogenous species complex, controlling the disease becomes difficult.Therefore, the study of R. pseudosolanacearum has great significance to generate effective disease management and treatment. Here, we assembled the isolate R. pseudosolanacearum strain T2C-Rasto, which possessed 183 contigs with 67.03% GC content of 5,628,295 bp in. This assembly included 4,893 protein sequences, 52 tRNA genes, and 3 rRNA genes. In addition, the virulence genes involved in the colonization of the bacterium and wilting to the host were defined in twitching motility (pilT, pilJ, pilH and pilG), chemotaxis (cheA and cheW), type VI secretion system (ompA, hcp, paar, tssB, tssC, tssF, tssG, tssK, tssH, tssJ, tssL and tssM), type III secretion system (hrpB and hrpF).

Details

Language :
English
ISSN :
23523409
Volume :
48
Issue :
109252-
Database :
Directory of Open Access Journals
Journal :
Data in Brief
Publication Type :
Academic Journal
Accession number :
edsdoj.095d5faa4b33428dbba5fba3d08279ba
Document Type :
article
Full Text :
https://doi.org/10.1016/j.dib.2023.109252