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Predicting the risk of primary Sjögren's syndrome with key N7-methylguanosine-related genes: A novel XGBoost model

Authors :
Hui Xie
Yin-mei Deng
Jiao-yan Li
Kai-hong Xie
Tan Tao
Jian-fang Zhang
Source :
Heliyon, Vol 10, Iss 10, Pp e31307- (2024)
Publication Year :
2024
Publisher :
Elsevier, 2024.

Abstract

Objectives: N7-methylguanosine (m7G) plays a crucial role in mRNA metabolism and other biological processes. However, its regulators' function in Primary Sjögren's Syndrome (PSS) remains enigmatic. Methods: We screened five key m7G-related genes across multiple datasets, leveraging statistical and machine learning computations. Based on these genes, we developed a prediction model employing the extreme gradient boosting decision tree (XGBoost) method to assess PSS risk. Immune infiltration in PSS samples was analyzed using the ssGSEA method, revealing the immune landscape of PSS patients. Results: The XGBoost model exhibited high accuracy, AUC, sensitivity, and specificity in both training, test sets and extra-test set. The decision curve confirmed its clinical utility. Our findings suggest that m7G methylation might contribute to PSS pathogenesis through immune modulation. Conclusions: m7G regulators play an important role in the development of PSS. Our study of m7G-realted genes may inform future immunotherapy strategies for PSS.

Details

Language :
English
ISSN :
24058440
Volume :
10
Issue :
10
Database :
Directory of Open Access Journals
Journal :
Heliyon
Publication Type :
Academic Journal
Accession number :
edsdoj.0679c87465984e9bba6c3112135c95a2
Document Type :
article
Full Text :
https://doi.org/10.1016/j.heliyon.2024.e31307