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Characterization of the complete chloroplast genome of Veronica arvensis and its phylogenomic inference in plantaginaceae

Authors :
Huabing Liu
Wenmiao He
Xiaobing Zhang
Zhimin Jiang
Qi Li
Chen Xia
Hui Wang
Source :
Mitochondrial DNA. Part B. Resources, Vol 7, Iss 11, Pp 1928-1932 (2022)
Publication Year :
2022
Publisher :
Taylor & Francis Group, 2022.

Abstract

Veronica arvensis, which is an annual flowering plant in the plantain family Plantaginaceae, has commonly used as a Chinese herbal medicine to treat malaria in China. Here, the complete plastome of V. arvensis was successfully assembled based on genome skimming sequencing. The plastome of V. arvensis was 149,386 bp in length, comprising a pair of inverted repeats (IR; 24,946 bp) separated by a large single-copy (LSC) region (82,004 bp) and a small single-copy (SSC) region (17,490 bp). The plastid genome encoded 113 unique genes, consisting of 79 protein-coding genes, 30 tRNA genes, and four rRNA genes, with 19 duplicated genes in the IR regions. Six plastid hotspot regions (trnH-psbA, trnK-rps16, atpI-rps2, ndhF-rpl32, ccsA-ndhD and rps15-ycf1) were identified within Veronica. Phylogenetic analysis showed that the representative species from Veronica was monophyletic. V. persica and V. polita formed a maximum clade, followed by sister to V. arvensis.

Details

Language :
English
ISSN :
23802359
Volume :
7
Issue :
11
Database :
Directory of Open Access Journals
Journal :
Mitochondrial DNA. Part B. Resources
Publication Type :
Academic Journal
Accession number :
edsdoj.0070e7c3cc442aebc43b3878e640bf7
Document Type :
article
Full Text :
https://doi.org/10.1080/23802359.2022.2139162