Back to Search Start Over

F-BIAS: Towards a distributed national core facility for Bioimage Analysis

Authors :
Ambroset, Mélodie
Anselmet, Marie
Benedetti, Clément
Meslin, Arthur
Maillot, Aurélien
Rouvière, Christian
Maucort, Guillaume
Breuilly, Marine
Albert, Marvin
Letort, Gaëlle
Trullo, Antonio
Bäcker, Volker
Mutterer, Jérôme
Cordelières, Fabrice
Pécot, Thierry
Phan, Minh-Son
Rigaud, Stéphane
Feyeux, Magali
Paul-Gilloteaux, Perrine
Macé, Anne-Sophie
Tinevez, Jean-Yves
Publication Year :
2024

Abstract

We discuss in this article the creation and organization of a national core facility for bioimage analysis, based on a distributed team. F-BIAS federates bioimage analysts across France and relies on them to deliver services to the researchers of this territory. The main challenge in implementing this structure is to provide significant scientific value to its members, thereby encouraging their active participation and persuading their respective host teams to support their involvement. F-BIAS accomplished this by creating a professional network that mitigates the negative effects of isolation experienced by its members, who are often the sole bioimage analyst within their local teams, and fosters the development of their technical skills. In a second phase we capitalized on F-BIAS to create a virtual, remotely-operating core facility for bioimage analysis, offering consultations and collaborative project services to the scientific community of France. The services are organized so that they also contribute to the technical proficiency of the analysts. To promote the creation of similar structures, we present and discuss here the organization of this nationally distributed bioimage analysis service core, highlighting successes and challenges.

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2409.15009
Document Type :
Working Paper