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In-context learning enables multimodal large language models to classify cancer pathology images

Authors :
Ferber, Dyke
Wölflein, Georg
Wiest, Isabella C.
Ligero, Marta
Sainath, Srividhya
Laleh, Narmin Ghaffari
Nahhas, Omar S. M. El
Müller-Franzes, Gustav
Jäger, Dirk
Truhn, Daniel
Kather, Jakob Nikolas
Publication Year :
2024

Abstract

Medical image classification requires labeled, task-specific datasets which are used to train deep learning networks de novo, or to fine-tune foundation models. However, this process is computationally and technically demanding. In language processing, in-context learning provides an alternative, where models learn from within prompts, bypassing the need for parameter updates. Yet, in-context learning remains underexplored in medical image analysis. Here, we systematically evaluate the model Generative Pretrained Transformer 4 with Vision capabilities (GPT-4V) on cancer image processing with in-context learning on three cancer histopathology tasks of high importance: Classification of tissue subtypes in colorectal cancer, colon polyp subtyping and breast tumor detection in lymph node sections. Our results show that in-context learning is sufficient to match or even outperform specialized neural networks trained for particular tasks, while only requiring a minimal number of samples. In summary, this study demonstrates that large vision language models trained on non-domain specific data can be applied out-of-the box to solve medical image-processing tasks in histopathology. This democratizes access of generalist AI models to medical experts without technical background especially for areas where annotated data is scarce.<br />Comment: 40 pages, 5 figures

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2403.07407
Document Type :
Working Paper