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Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA

Authors :
Yang, Kaiyuan
Musio, Fabio
Ma, Yihui
Juchler, Norman
Paetzold, Johannes C.
Al-Maskari, Rami
Höher, Luciano
Li, Hongwei Bran
Hamamci, Ibrahim Ethem
Sekuboyina, Anjany
Shit, Suprosanna
Huang, Houjing
Prabhakar, Chinmay
de la Rosa, Ezequiel
Waldmannstetter, Diana
Kofler, Florian
Navarro, Fernando
Menten, Martin
Ezhov, Ivan
Rueckert, Daniel
Vos, Iris
Ruigrok, Ynte
Velthuis, Birgitta
Kuijf, Hugo
Hämmerli, Julien
Wurster, Catherine
Bijlenga, Philippe
Westphal, Laura
Bisschop, Jeroen
Colombo, Elisa
Baazaoui, Hakim
Makmur, Andrew
Hallinan, James
Wiestler, Bene
Kirschke, Jan S.
Wiest, Roland
Montagnon, Emmanuel
Letourneau-Guillon, Laurent
Galdran, Adrian
Galati, Francesco
Falcetta, Daniele
Zuluaga, Maria A.
Lin, Chaolong
Zhao, Haoran
Zhang, Zehan
Ra, Sinyoung
Hwang, Jongyun
Park, Hyunjin
Chen, Junqiang
Wodzinski, Marek
Müller, Henning
Shi, Pengcheng
Liu, Wei
Ma, Ting
Yalçin, Cansu
Hamadache, Rachika E.
Salvi, Joaquim
Llado, Xavier
Estrada, Uma Maria Lal-Trehan
Abramova, Valeriia
Giancardo, Luca
Oliver, Arnau
Liu, Jialu
Huang, Haibin
Cui, Yue
Lin, Zehang
Liu, Yusheng
Zhu, Shunzhi
Patel, Tatsat R.
Tutino, Vincent M.
Orouskhani, Maysam
Wang, Huayu
Mossa-Basha, Mahmud
Zhu, Chengcheng
Rokuss, Maximilian R.
Kirchhoff, Yannick
Disch, Nico
Holzschuh, Julius
Isensee, Fabian
Maier-Hein, Klaus
Sato, Yuki
Hirsch, Sven
Wegener, Susanne
Menze, Bjoern
Publication Year :
2023

Abstract

The Circle of Willis (CoW) is an important network of arteries connecting major circulations of the brain. Its vascular architecture is believed to affect the risk, severity, and clinical outcome of serious neuro-vascular diseases. However, characterizing the highly variable CoW anatomy is still a manual and time-consuming expert task. The CoW is usually imaged by two angiographic imaging modalities, magnetic resonance angiography (MRA) and computed tomography angiography (CTA), but there exist limited public datasets with annotations on CoW anatomy, especially for CTA. Therefore we organized the TopCoW Challenge in 2023 with the release of an annotated CoW dataset. The TopCoW dataset was the first public dataset with voxel-level annotations for thirteen possible CoW vessel components, enabled by virtual-reality (VR) technology. It was also the first large dataset with paired MRA and CTA from the same patients. TopCoW challenge formalized the CoW characterization problem as a multiclass anatomical segmentation task with an emphasis on topological metrics. We invited submissions worldwide for the CoW segmentation task, which attracted over 140 registered participants from four continents. The top performing teams managed to segment many CoW components to Dice scores around 90%, but with lower scores for communicating arteries and rare variants. There were also topological mistakes for predictions with high Dice scores. Additional topological analysis revealed further areas for improvement in detecting certain CoW components and matching CoW variant topology accurately. TopCoW represented a first attempt at benchmarking the CoW anatomical segmentation task for MRA and CTA, both morphologically and topologically.<br />Comment: 24 pages, 11 figures, 9 tables. Summary Paper for the MICCAI TopCoW 2023 Challenge

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2312.17670
Document Type :
Working Paper