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survex: an R package for explaining machine learning survival models

Authors :
Spytek, Mikołaj
Krzyziński, Mateusz
Langbein, Sophie Hanna
Baniecki, Hubert
Wright, Marvin N.
Biecek, Przemysław
Source :
Bioinformatics, 39(12):btad723, 2023
Publication Year :
2023

Abstract

Due to their flexibility and superior performance, machine learning models frequently complement and outperform traditional statistical survival models. However, their widespread adoption is hindered by a lack of user-friendly tools to explain their internal operations and prediction rationales. To tackle this issue, we introduce the survex R package, which provides a cohesive framework for explaining any survival model by applying explainable artificial intelligence techniques. The capabilities of the proposed software encompass understanding and diagnosing survival models, which can lead to their improvement. By revealing insights into the decision-making process, such as variable effects and importances, survex enables the assessment of model reliability and the detection of biases. Thus, transparency and responsibility may be promoted in sensitive areas, such as biomedical research and healthcare applications.

Details

Database :
arXiv
Journal :
Bioinformatics, 39(12):btad723, 2023
Publication Type :
Report
Accession number :
edsarx.2308.16113
Document Type :
Working Paper
Full Text :
https://doi.org/10.1093/bioinformatics/btad723