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EdgeAL: An Edge Estimation Based Active Learning Approach for OCT Segmentation

Authors :
Kadir, Md Abdul
Alam, Hasan Md Tusfiqur
Sonntag, Daniel
Publication Year :
2023

Abstract

Active learning algorithms have become increasingly popular for training models with limited data. However, selecting data for annotation remains a challenging problem due to the limited information available on unseen data. To address this issue, we propose EdgeAL, which utilizes the edge information of unseen images as {\it a priori} information for measuring uncertainty. The uncertainty is quantified by analyzing the divergence and entropy in model predictions across edges. This measure is then used to select superpixels for annotation. We demonstrate the effectiveness of EdgeAL on multi-class Optical Coherence Tomography (OCT) segmentation tasks, where we achieved a 99% dice score while reducing the annotation label cost to 12%, 2.3%, and 3%, respectively, on three publicly available datasets (Duke, AROI, and UMN). The source code is available at \url{https://github.com/Mak-Ta-Reque/EdgeAL}<br />Comment: This version of the contribution has been submitted in miccai2023

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.2307.10745
Document Type :
Working Paper