Perplexity-free Parametric t-SNE

The t-distributed Stochastic Neighbor Embedding (t-SNE) algorithm is a ubiquitously employed dimensionality reduction (DR) method. Its non-parametric nature and impressive efficacy motivated its parametric extension. It is however bounded to a user-defined perplexity parameter, restricting its DR quality compared to recently developed multi-scale perplexity-free approaches. This paper hence proposes a multi-scale parametric t-SNE scheme, relieved from the perplexity tuning and with a deep neural network implementing the mapping. It produces reliable embeddings with out-of-sample extensions, competitive with the best perplexity adjustments in terms of neighborhood preservation on multiple data sets.
Comment: ESANN 2020 proceedings, European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. Online event, 2-4 October 2020, i6doc.com publ., ISBN 978-2-87587-074-2. Available from http://www.i6doc.com/en/