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A trajectory approach to two-state kinetics of single particles on sculpted energy landscapes

Authors :
Wu, David
Ghosh, Kingshuk
Inamdar, Mandar
Lee, Heun Jin
Fraser, Scott
Dill, Ken
Phillips, Rob
Publication Year :
2008

Abstract

We study the trajectories of a single colloidal particle as it hops between two energy wells A and B, which are sculpted using adjacent optical traps by controlling their respective power levels and separation. Whereas the dynamical behaviors of such systems are often treated by master-equation methods that focus on particles as actors, we analyze them here instead using a trajectory-based variational method called Maximum Caliber, which utilizes a dynamical partition function. We show that the Caliber strategy accurately predicts the full dynamics that we observe in the experiments: from the observed averages, it predicts second and third moments and covariances, with no free parameters. The covariances are the dynamical equivalents of Maxwell-like equilibrium reciprocal relations and Onsager-like dynamical relations. In short, this work describes an experimental model system for exploring full trajectory distributions in one-particle two-state systems, and it validates the Caliber approach as a useful way to understand trajectory-based dynamical distribution functions in this system.<br />Comment: 4 pages, 4 figures, submitted to Physical Review Letters

Details

Database :
arXiv
Publication Type :
Report
Accession number :
edsarx.0803.0360
Document Type :
Working Paper