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Draft genome of the brown-rot fungus Fomitopsis pinicola GR9-4

Authors :
Kancherla, Reddy Prakash
Durling, Mikael Brandström
Stenlid, Jan
Högberg, Nils
Source :
Data in Brief, Vol 15, Iss, Pp 496-500 (2017), Data in Brief
Publication Year :
2017
Publisher :
Elsevier, 2017.

Abstract

Basidiomycete brown-rot fungi have a huge importance for wood decomposition and thus the global carbon cycle. Here, we present the genome sequence of Fomitopsis pinicola GR9-4 which represent different F. pinicola clade than the previously sequenced North American isolate FP-58527 SS1. The genome was sequenced by using a paired-end sequence library of Illumina and a 2.5k and 5k mate-pair library (ABI SOLiD). The final assembly adds up to a size of 45 Mb (including gaps between contigs), with a GC-content of 56%. The gene prediction resulted in 13,888 gene models. The genome sequence will be used as a basis for understanding population genomics, genome-wide association studies and wood decay mechanisms of this brown-rot fungus. Keywords: Draft genome, Brown-rot, Fomitopsis

Details

Language :
English
ISSN :
23523409
Volume :
15
Database :
OpenAIRE
Journal :
Data in Brief
Accession number :
edsair.pmid.dedup....a93e356acfce9d272e8c6802a054f80d