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Imaging tissue-mimic with light sheet microscopy: A comparative guideline

Authors :
Andilla, Jordi
Jorand, Raphaël
Olarte, Omar E.
Dufour, Alexandre C.
Cazales, Martine
Le Montagner, Yoann
Ceolato, Romain
RIVIERE, Nicolas
Olivo-Marin, Jean-Christophe
Loza-Alvarez, Pablo
Lorenzo, Corinne
Institut de Ciencies Fotoniques [Castelldefels] (ICFO)
Institut des Technologies Avancées en sciences du Vivant (ITAV)
Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
Analyse d'images biologiques - Biological Image Analysis (BIA)
Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
ONERA - The French Aerospace Lab [Toulouse]
ONERA
This work was supported by the CNRS, l’Université Paul Sabatier, la Région Midi-Pyrénées, l’Agence Nationale de la Recherche (ANR Blanc 2012) and la Fondation pour la Recherche Médicale (Equipe labellisée 2012). This research was also partially supported by Fundació Cellex Barcelona and partially conducted at the Institute of Photonic Sciences « Super-Resolution Light Nanoscopy Facility ». The research leading to these results has received funding from LASERLAB-EUROPE (grant agreement n° 284464, EC’s Seventh Framework Programme).
European Project: 284464,EC:FP7:INFRA,FP7-INFRASTRUCTURES-2011-1,LASERLAB-EUROPE(2012)
Université Toulouse III - Paul Sabatier (UT3)
Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)
Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)
Source :
Scientific Reports, Scientific Reports, Nature Publishing Group, 2017, 7, pp.44939. ⟨10.1038/srep44939⟩, Scientific Reports, 2017, 7, pp.44939. ⟨10.1038/srep44939⟩
Publication Year :
2017
Publisher :
HAL CCSD, 2017.

Abstract

International audience; Tissue mimics (TMs) on the scale of several hundred microns provide a beneficial cell culture configuration for in vitro engineered tissue and are currently under the spotlight in tissue engineering and regenerative medicine. Due to the cell density and size, TMs are fairly inaccessible to optical observation and imaging within these samples remains challenging. Light Sheet Fluorescence Microscopy (LSFM)- an emerging and attractive technique for 3D optical sectioning of large samples- appears to be a particularly well-suited approach to deal with them. In this work, we compared the effectiveness of different light sheet illumination modalities reported in the literature to improve resolution and/or light exposure for complex 3D samples. In order to provide an acute and fair comparative assessment, we also developed a systematic, computerized benchmarking method. The outcomes of our experiment provide meaningful information for valid comparisons and arises the main differences between the modalities when imaging different types of TMs.

Details

Language :
English
ISSN :
20452322
Database :
OpenAIRE
Journal :
Scientific Reports, Scientific Reports, Nature Publishing Group, 2017, 7, pp.44939. ⟨10.1038/srep44939⟩, Scientific Reports, 2017, 7, pp.44939. ⟨10.1038/srep44939⟩
Accession number :
edsair.pmid.dedup....230c39f5fd965496e6333ba5032793ec