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Catalase (
- Source :
- International Journal of Molecular Sciences
- Publication Year :
- 2021
-
Abstract
- Catalases (CATs) are present in almost all living organisms and play important roles in plant development and response to various stresses. However, there is relatively little information on CAT genes in wheat and related Triticeae species. A few studies on CAT family genes in wheat have been reported. In this study, ten CAT proteins (TaCATs) were identified in wheat and classified into three groups based on their phylogenetic features and sequence analysis. The analysis of the structure and motif composition of the TaCAT proteins suggested that a segmental duplication event occurred in the TaCAT gene family. Collinearity relationship analysis among different species showed that there were three orthologous CAT genes in rice and in maize. By analyzing the cis-elements in the promoter regions, we speculated that TaCAT genes expression might be regulated by light, oxygen deficit, methyl jasmonate and abscisic acid, and by transcription factors such as MYB. A Gene Ontology (GO)-based analysis showed that TaCAT proteins may be related to the response to various stresses, are cytoplasm localized, and may function as antioxidant enzymes. RT-qPCR and transcriptome data analyses exhibited distinct expression patterns of TaCAT genes in different tissues and in response to various treatments. In this study, a comprehensive analysis of wheat CAT genes was performed, enriching our knowledge of CAT genes and providing a foundation for further functional analyses of this gene family in wheat.
- Subjects :
- abiotic stress
Gene Expression Profiling
Chromosome Mapping
Computational Biology
Fluorescent Antibody Technique
High-Throughput Nucleotide Sequencing
Molecular Sequence Annotation
CAT
Catalase
Article
Evolution, Molecular
genome-wide
Protein Transport
Gene Expression Regulation, Plant
Multigene Family
wheat
expression pattern
gene family
Promoter Regions, Genetic
Transcriptome
Conserved Sequence
Phylogeny
Triticum
Subjects
Details
- ISSN :
- 14220067
- Volume :
- 23
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- International journal of molecular sciences
- Accession number :
- edsair.pmid..........e7001e6412cc1b06263ca14d12209242