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Androglobin gene expression patterns and FOXJ1-dependent regulation indicate its functional association with ciliogenesis
- Source :
- The Journal of Biological Chemistry
- Publication Year :
- 2020
-
Abstract
- Androglobin (ADGB) represents the latest addition to the globin superfamily in metazoans. The chimeric protein comprises a calpain domain and a unique circularly permutated globin domain. ADGB expression levels are most abundant in mammalian testis, but its cell-type-specific expression, regulation, and function have remained unexplored. Analyzing bulk and single-cell mRNA-Seq data from mammalian tissues, we found that—in addition to the testes—ADGB is prominently expressed in the female reproductive tract, lungs, and brain, specifically being associated with cell types forming motile cilia. Correlation analysis suggested coregulation of ADGB with FOXJ1, a crucial transcription factor of ciliogenesis. Investigating the transcriptional regulation of the ADGB gene, we characterized its promoter using epigenomic datasets, exogenous promoter-dependent luciferase assays, and CRISPR/dCas9-VPR-mediated activation approaches. Reporter gene assays revealed that FOXJ1 indeed substantially enhanced luciferase activity driven by the ADGB promoter. ChIP assays confirmed binding of FOXJ1 to the endogenous ADGB promoter region. We dissected the minimal sequence required for FOXJ1-dependent regulation and fine mapped the FOXJ1 binding site to two evolutionarily conserved regions within the ADGB promoter. FOXJ1 overexpression significantly increased endogenous ADGB mRNA levels in HEK293 and MCF-7 cells. Similar results were observed upon RFX2 overexpression, another key transcription factor in ciliogenesis. The complex transcriptional regulation of the ADGB locus was illustrated by identifying a distal enhancer, responsible for synergistic regulation by RFX2 and FOXJ1. Finally, cell culture studies indicated an ADGB-dependent increase in the number of ciliated cells upon overexpression of the full-length protein, confirming a ciliogenesis-associated role of ADGB in mammals.
- Subjects :
- Male
Regulatory Factor X Transcription Factors
transcription enhancer
hemoglobin myoglobin
ALI, air–liquid interface
ADGB, androglobin
transcriptomics
TSS, transcriptional start site
NGB, neuroglobin
Testis
Animals
Humans
Protein Isoforms
Cilia
Promoter Regions, Genetic
Lung
transcription factor
ANOVA, analysis of variance
Binding Sites
RT, reverse transcription
Sequence Analysis, RNA
CYGB, cytoglobin
Ovary
mTEC, mouse tracheal epithelial cells
sgRNA, single guide RNA
Brain
Gene Expression Regulation, Developmental
Molecular Sequence Annotation
Forkhead Transcription Factors
bioinformatics
Globins
ChIP, chromatin immunoprecipitation
MB, myoglobin
Gene Ontology
HEK293 Cells
Enhancer Elements, Genetic
CRISPR/cas
PFA, para-formaldehyde
gene expression
MCF-7 Cells
HB, hemoglobin
Calmodulin-Binding Proteins
Cattle
Female
Transcriptome
transcription regulation
HeLa Cells
Protein Binding
Research Article
Subjects
Details
- ISSN :
- 1083351X
- Volume :
- 296
- Database :
- OpenAIRE
- Journal :
- The Journal of biological chemistry
- Accession number :
- edsair.pmid..........160109fd9eb4e85097a506a6e38eff46