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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio

Authors :
Palaniappan, K
Meier-Kolthoff, JP
Teshima, H
Nolan, M
Lapidus, A
Tice, H
Del Rio, TG
Cheng, JF
Han, C
Tapia, R
Goodwin, LA
Pitluck, S
Liolios, K
Mavromatis, K
Pagani, I
Ivanova, N
Mikhailova, N
Pati, A
Chen, A
Rohde, M
Mayilraj, S
Spring, S
Detter, JC
Göker, M
Bristow, J
Eisen, JA
Markowitz, V
Hugenholtz, P
Kyrpides, NC
Klenk, HP
Woyke, T
Source :
Palaniappan, K; Meier-Kolthoff, JP; Teshima, H; Nolan, M; Lapidus, A; Tice, H; et al.(2013). Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio. Standards in Genomic Sciences, 9(1), 57-70. doi: 10.4056/sigs.4237901. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/4pq3d6kn
Publication Year :
2013
Publisher :
eScholarship, University of California, 2013.

Abstract

Thermanaerovibrio velox Zavarzina et al. 2000 is a member of the Synergistaceae, a family in the phylum Synergistetes that is already well-characterized at the genome level. Members of this phylum were described as Gram-negative staining anaerobic bacteria with a rod/vibrioid cell shape and possessing an atypical outer cell envelope. They inhabit a large variety of an-aerobic environments including soil, oil wells, wastewater treatment plants and animal gas-trointestinal tracts. They are also found to be linked to sites of human diseases such as cysts, abscesses, and areas of periodontal disease. The moderately thermophilic and organotrophic T. velox shares most of its morphologic and physiologic features with the closely related spe-cies, T. acidaminovorans. In addition to Su883T, the type strain of T. acidaminovorans, stain Z-9701Tis the second type strain in the genus Thermanaerovibrio to have its genome se-quence published. Here we describe the features of this organism, together with the non-contiguous genome sequence and annotation. The 1,880,838 bp long chromosome (non-contiguous finished sequence) with its 1,751 protein-coding and 59 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. © BY-SA.

Details

Language :
English
Database :
OpenAIRE
Journal :
Palaniappan, K; Meier-Kolthoff, JP; Teshima, H; Nolan, M; Lapidus, A; Tice, H; et al.(2013). Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701T) and emended description of the genus Thermanaerovibrio. Standards in Genomic Sciences, 9(1), 57-70. doi: 10.4056/sigs.4237901. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/4pq3d6kn
Accession number :
edsair.od.......325..bf7e9714d6c71ee7b0433bd4514ab40f
Full Text :
https://doi.org/10.4056/sigs.4237901.