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Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma
- Source :
- Nature genetics, vol 46, iss 11
- Publication Year :
- 2014
- Publisher :
- eScholarship, University of California, 2014.
-
Abstract
- Diffuse large B cell lymphoma (DLBCL) is the most common lymphoma subtype and is clinically aggressive. To identify genetic susceptibility loci for DLBCL, we conducted a meta-analysis of 3 new genome-wide association studies (GWAS) and 1 previous scan, totaling 3,857 cases and 7,666 controls of European ancestry, with additional genotyping of 9 promising SNPs in 1,359 cases and 4,557 controls. In our multi-stage analysis, five independent SNPs in four loci achieved genome-wide significance marked by rs116446171 at 6p25.3 (EXOC2; P = 2.33 × 10(-21)), rs2523607 at 6p21.33 (HLA-B; P = 2.40 × 10(-10)), rs79480871 at 2p23.3 (NCOA1; P = 4.23 × 10(-8)) and two independent SNPs, rs13255292 and rs4733601, at 8q24.21 (PVT1; P = 9.98 × 10(-13) and 3.63 × 10(-11), respectively). These data provide substantial new evidence for genetic susceptibility to this B cell malignancy and point to pathways involved in immune recognition and immune function in the pathogenesis of DLBCL.
- Subjects :
- Likelihood Functions
Genotype
Lymphoma
Quantitative Trait Loci
Human Genome
Chromosome Mapping
Computational Biology
Single Nucleotide
Hematology
Biological Sciences
Diffuse
Medical and Health Sciences
White People
Rare Diseases
Genetic Loci
Large B-Cell
Genetics
Humans
2.1 Biological and endogenous factors
Genetic Predisposition to Disease
Polymorphism
Aetiology
Genome-Wide Association Study
Cancer
Developmental Biology
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Nature genetics, vol 46, iss 11
- Accession number :
- edsair.od.......325..84f675f0ea090d0fa8610cd30c2b95cc