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Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma

Authors :
Cerhan, James R
Berndt, Sonja I
Vijai, Joseph
Ghesquières, Hervé
McKay, James
Wang, Sophia S
Wang, Zhaoming
Yeager, Meredith
Conde, Lucia
de Bakker, Paul IW
Nieters, Alexandra
Cox, David
Burdett, Laurie
Monnereau, Alain
Flowers, Christopher R
De Roos, Anneclaire J
Brooks-Wilson, Angela R
Lan, Qing
Severi, Gianluca
Melbye, Mads
Gu, Jian
Jackson, Rebecca D
Kane, Eleanor
Teras, Lauren R
Purdue, Mark P
Vajdic, Claire M
Spinelli, John J
Giles, Graham G
Albanes, Demetrius
Kelly, Rachel S
Zucca, Mariagrazia
Bertrand, Kimberly A
Zeleniuch-Jacquotte, Anne
Lawrence, Charles
Hutchinson, Amy
Zhi, Degui
Habermann, Thomas M
Link, Brian K
Novak, Anne J
Dogan, Ahmet
Asmann, Yan W
Liebow, Mark
Thompson, Carrie A
Ansell, Stephen M
Witzig, Thomas E
Weiner, George J
Veron, Amelie S
Zelenika, Diana
Tilly, Hervé
Haioun, Corinne
Molina, Thierry Jo
Hjalgrim, Henrik
Glimelius, Bengt
Adami, Hans-Olov
Bracci, Paige M
Riby, Jacques
Smith, Martyn T
Holly, Elizabeth A
Cozen, Wendy
Hartge, Patricia
Morton, Lindsay M
Severson, Richard K
Tinker, Lesley F
North, Kari E
Becker, Nikolaus
Benavente, Yolanda
Boffetta, Paolo
Brennan, Paul
Foretova, Lenka
Maynadie, Marc
Staines, Anthony
Lightfoot, Tracy
Crouch, Simon
Smith, Alex
Roman, Eve
Diver, W Ryan
Offit, Kenneth
Zelenetz, Andrew
Klein, Robert J
Villano, Danylo J
Zheng, Tongzhang
Zhang, Yawei
Holford, Theodore R
Kricker, Anne
Turner, Jenny
Southey, Melissa C
Clavel, Jacqueline
Virtamo, Jarmo
Weinstein, Stephanie
Riboli, Elio
Vineis, Paolo
Kaaks, Rudolph
Trichopoulos, Dimitrios
Vermeulen, Roel CH
Boeing, Heiner
Tjonneland, Anne
Angelucci, Emanuele
Di Lollo, Simonetta
Rais, Marco
Birmann, Brenda M
Source :
Nature genetics, vol 46, iss 11
Publication Year :
2014
Publisher :
eScholarship, University of California, 2014.

Abstract

Diffuse large B cell lymphoma (DLBCL) is the most common lymphoma subtype and is clinically aggressive. To identify genetic susceptibility loci for DLBCL, we conducted a meta-analysis of 3 new genome-wide association studies (GWAS) and 1 previous scan, totaling 3,857 cases and 7,666 controls of European ancestry, with additional genotyping of 9 promising SNPs in 1,359 cases and 4,557 controls. In our multi-stage analysis, five independent SNPs in four loci achieved genome-wide significance marked by rs116446171 at 6p25.3 (EXOC2; P = 2.33 × 10(-21)), rs2523607 at 6p21.33 (HLA-B; P = 2.40 × 10(-10)), rs79480871 at 2p23.3 (NCOA1; P = 4.23 × 10(-8)) and two independent SNPs, rs13255292 and rs4733601, at 8q24.21 (PVT1; P = 9.98 × 10(-13) and 3.63 × 10(-11), respectively). These data provide substantial new evidence for genetic susceptibility to this B cell malignancy and point to pathways involved in immune recognition and immune function in the pathogenesis of DLBCL.

Details

Database :
OpenAIRE
Journal :
Nature genetics, vol 46, iss 11
Accession number :
edsair.od.......325..84f675f0ea090d0fa8610cd30c2b95cc