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Liver proteome dataset of Sparus aurata exposed to low temperatures
- Source :
- Data in Brief, Vol 26, Iss, Pp-(2019), Data in Brief
- Publication Year :
- 2019
- Publisher :
- Elsevier BV, 2019.
-
Abstract
- We report the proteomic dataset of livers from Sparus aurata exposed to low temperature during growth. Gilthead sea bream juveniles were reared in Recirculating Aquaculture Systems (RAS) and exposed to a temperature ramp made of two phases of four weeks each: a Cooling phase from 18 °C (t0) to 11 °C (t1) and a Cold Maintenance phase at 11 °C (t1-t2) in a 8 week feeding trial. At the end of the experiment, sea bream livers were collected and analyzed with a shotgun proteomics approach based on filter-aided sample preparation followed by tandem mass spectrometry, peptide identification carried out using Sequest-HT as search engine within the Proteome Discoverer informatic platform, and label-free differential analysis.The mass spectrometry data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository with the dataset identifier PXD011059 (Vizcaíno et al., 2016; Deutsch et al., 2017; Perez-Riverol et al., 2016). The dataset described here is also related to the research article entitled “Liver proteomics of gilthead sea bream (Sparus aurata) exposed to cold stress” (Ghisaura et al., 2019). Keywords: Cold stress, Gilthead sea bream, Low temperature exposure, Liver proteins, Shotgun proteomics, Liver proteomic dataset
- Subjects :
- Low temperature exposure
Biology
lcsh:Computer applications to medicine. Medical informatics
Proteomics
Tandem mass spectrometry
Differential analysis
03 medical and health sciences
0302 clinical medicine
Biochemistry, Genetics and Molecular Biology
Shotgun proteomics
Maintenance phase
Research article
Food science
lcsh:Science (General)
Cold stress
Liver proteins
030304 developmental biology
0303 health sciences
Multidisciplinary
Gilthead sea bream
Proteome
lcsh:R858-859.7
Liver proteomic dataset
030217 neurology & neurosurgery
lcsh:Q1-390
Subjects
Details
- ISSN :
- 23523409
- Volume :
- 26
- Database :
- OpenAIRE
- Journal :
- Data in Brief
- Accession number :
- edsair.doi.dedup.....fde37fb56da7773a64d7d03bb868fd79