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Cohnella saccharovorans sp. nov., isolated from ginseng soil
- Source :
- International journal of systematic and evolutionary microbiology. 66(4)
- Publication Year :
- 2016
-
Abstract
- A novel bacterial strain, CJ22T, was isolated from soil of a ginseng field located in Anseong, Korea. Cells of strain CJ22T were aerobic, Gram-stain-positive, endospore-forming, motile, oxidase- and catalase-positive and rod-shaped. The isolate grew optimally at pH 7 and 30 °C. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain CJ22T belonged to the genus Cohnella, displaying highest sequence similarity of 97.3 % with Cohnella panacarvi Gsoil 349T. DNA–DNA relatedness between strain CJ22T and its closest relative was 35.5 % (reciprocal value, 23.8 %). The phenotypic features of strain CJ22T also distinguished it from related species of the genus Cohnella. The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The major isoprenoid quinone was menaquinone MK-7 and the major polar lipids were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, lysyl-phosphatidylglycerol, two unidentified phospholipids and two unidentified aminophospholipids. The predominant cellular fatty acids of strain CJ22T were anteiso-C15 : 0, iso-C16 : 0 and C16 : 0. The DNA G+C content was 63.1 mol%. Based on data from this polyphasic taxonomic study, strain CJ22T is considered to represent a novel species of the genus Cohnella, for which the name Cohnella saccharovorans sp. nov. is proposed. The type strain is CJ22T ( = KACC 17501T = JCM 19227T).
- Subjects :
- 0106 biological sciences
0301 basic medicine
DNA, Bacterial
Sequence analysis
Molecular Sequence Data
Panax
Diamino acid
Peptidoglycan
Biology
Diaminopimelic Acid
010603 evolutionary biology
01 natural sciences
Microbiology
03 medical and health sciences
chemistry.chemical_compound
Phylogenetics
RNA, Ribosomal, 16S
Republic of Korea
Ecology, Evolution, Behavior and Systematics
Phospholipids
Phylogeny
Soil Microbiology
Bacillales
Base Composition
Fatty Acids
Nucleic Acid Hybridization
Vitamin K 2
General Medicine
Sequence Analysis, DNA
Ribosomal RNA
16S ribosomal RNA
Bacterial Typing Techniques
030104 developmental biology
chemistry
Biochemistry
Diaminopimelic acid
Soil microbiology
Subjects
Details
- ISSN :
- 14665034
- Volume :
- 66
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology
- Accession number :
- edsair.doi.dedup.....fdc9f99b85ef096e4ea0dd297a50866f