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Whole Slide Image to DICOM Conversion as Event-Driven Cloud Infrastructure

Authors :
Brundage, David
Rosenthal, Jacob
Carelli, Ryan
Rand, Sophie
Umeton, Renato
Loda, Massimo
Marchionni, Luigi
Publication Year :
2022
Publisher :
arXiv, 2022.

Abstract

The Digital Imaging and Communication in Medicine (DICOM) specification is increasingly being adopted in digital pathology to promote data standardization and interoperability. Efficient conversion of proprietary file formats into the DICOM standard format is a key requirement for institutional adoption of DICOM, necessary to ensure compatibility with existing scanners, microscopes, and data archives. Here, we present a cloud computing architecture for DICOM conversion, leveraging an event-driven microservices framework hosted in a serverless computing environment in Google Cloud to enable efficient DICOM conversion at scales ranging from individual images to institutional-scale datasets. In our experiments, employing a microservices-based approach substantially reduced runtime to process a batch of images relative to parallel and serial processing. This work demonstrates the importance of designing scalable systems for enabling enterprise-level adoption of digital pathology workflows, and provides a blueprint for using a microservice architecture to enable efficient DICOM conversion.

Details

Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....fdb16d0fdcf00d5d8757025ec355675d
Full Text :
https://doi.org/10.48550/arxiv.2203.13888