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Association of CFTR gene variants with nontuberculous mycobacterial lung disease in a Korean population with a low prevalence of cystic fibrosis
- Source :
- Journal of Human Genetics. 58:298-303
- Publication Year :
- 2013
- Publisher :
- Springer Science and Business Media LLC, 2013.
-
Abstract
- Several lines of evidence suggest that in Caucasian populations, mutations in the cystic fibrosis (CF) transmembrane conductance regulator (CFTR) gene are associated with susceptibility to lung disease caused by nontuberculous mycobacteria (NTM). However, there is little data available in Asian populations, in which the prevalence of CF is very low. Therefore, we investigated this potential relationship in a Korean population. Sixty patients who fulfilled the diagnostic criteria for NTM lung disease were screened for genetic alterations in the CFTR gene by whole-exon resequencing. For all identified CFTR gene variants, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) genotyping was performed. Genotype and haplotype data were compared between 360 patients with NTM lung disease and 446 healthy controls. Among 13 CFTR genetic variants that were found by whole-exon resequencing, Q1352H showed a significantly higher frequency in NTM patients than in controls, giving an odds ratio (OR) of 4.27 (95% confidence interval (CI), 1.43-12.78). A haplotype with Q1352H showed the strongest association with the disease, with an OR of 3.73 (95% CI, 1.50-9.25). Furthermore, all Q1352H alleles were associated with the V allele of the V470M variant. Our results suggest that CFTR gene variants may increase susceptibility to NTM lung disease in the Korean population. Q1352H appears to be strongly related to NTM lung disease susceptibility in the Korean population.
- Subjects :
- Adult
Lung Diseases
Male
Cystic Fibrosis
Genotype
Cystic Fibrosis Transmembrane Conductance Regulator
Mycobacterium Infections, Nontuberculous
Disease
Polymorphism, Single Nucleotide
Cystic fibrosis
Young Adult
Asian People
Gene Frequency
Republic of Korea
Prevalence
Genetics
medicine
Humans
Allele
Genotyping
Alleles
Genetics (clinical)
Aged
Aged, 80 and over
biology
Haplotype
Genetic Variation
Exons
Odds ratio
Middle Aged
bacterial infections and mycoses
biology.organism_classification
medicine.disease
Mutation
Immunology
Female
Nontuberculous mycobacteria
Subjects
Details
- ISSN :
- 1435232X and 14345161
- Volume :
- 58
- Database :
- OpenAIRE
- Journal :
- Journal of Human Genetics
- Accession number :
- edsair.doi.dedup.....fce438212476c8bace4bbde3b4699d36
- Full Text :
- https://doi.org/10.1038/jhg.2013.19