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Aeromonas aquatica sp. nov., Aeromonas finlandiensis sp. nov. and Aeromonas lacus sp. nov. isolated from Finnish waters associated with cyanobacterial blooms
- Source :
- Systematic and Applied Microbiology
- Publication Year :
- 2015
- Publisher :
- Elsevier BV, 2015.
-
Abstract
- Three groups of Aeromonas strains isolated from Finland lakes experiencing cyanobacterial blooms could not be assigned to any known species of this genus on the basis of 16S rRNA and rpoD gene sequences. The Multilocus Phylogenetic Analysis (MLPA) of the concatenated sequence of seven genes (gyrB, rpoD, recA, dnaJ, gyrA, dnaX and atpD; 4093bp) showed that the three groups of strains did not cluster with any known Aeromonas spp. and formed three independent lineages. This was confirmed by performing the analysis with their closest relatives using 15 genes (the latter 7 and cpn60, dnaK, gltA, mdh, radA, rpoB, tsf, zipA; 8751bp). Furthermore, ANI results between the genomes of the type strains of the three potential new species and those of their close relatives were all
- Subjects :
- 0723-2020
sekvensointi
Molecular Sequence Data
water
systematiikka
DNA, Ribosomal
järvet
Applied Microbiology and Biotechnology
Microbiology
new taxa
taksonomia
Genus
RNA, Ribosomal, 16S
Suomi
dnaX
Cluster Analysis
lajit
sinilevät
syanobakteerit
Finland
Phylogeny
Ecology, Evolution, Behavior and Systematics
Ciències de la salut
perinnöllisyystiede
biology
Strain (chemistry)
Phylogenetic tree
ta1184
DNA–DNA hybridization
ta1183
Health sciences
geenitekniikka
DNA-Directed RNA Polymerases
biology.organism_classification
16S ribosomal RNA
rpoB
Ciencias de la salud
Lakes
Aeromonas
Genes, Bacterial
sekvenssianalyysi
ANI
polyphasic
mikrobiologia
Multilocus Sequence Typing
Subjects
Details
- ISSN :
- 07232020
- Volume :
- 38
- Database :
- OpenAIRE
- Journal :
- Systematic and Applied Microbiology
- Accession number :
- edsair.doi.dedup.....fbcf4a4ad35d5a57cac785510185c01c
- Full Text :
- https://doi.org/10.1016/j.syapm.2015.02.005