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The Absorption Spectrum of Guanine Based Radicals: a Comparative Computational Analysis

Authors :
Sonia Coriani
Roberto Improta
Haritha Asha
Lara Martínez Fernández
Javier Cerezo
Fabrizio Santoro
Source :
Martínez Fernández, L, Cerezo, J, Asha, H, Santoro, F, Coriani, S & Improta, R 2019, ' The absorption spectrum of guanine based radicals: a comparative computational analysis ', ChemPhotoChem, vol. 3, no. 9, pp. 846-855 . https://doi.org/10.1002/cptc.201900107, ChemPhotoChem
Publication Year :
2019
Publisher :
Wiley, 2019.

Abstract

The excited states of the three radical derivatives of guanine, i.e. guanine cation (G+) and its two main deprotonated derivatives (G-H1 and G-H2) have been characterized in the Franck-Condon region by TD-DFT, using different functionals, CASPT2, and EOM-EE-CCSD calculations. In the gas phase, all the methods provide a similar description of the main spectral features, the pictures provided by TD-DFT, with long range corrected functionals, and EOM-EE-CCSD being very close. Solvent effects are then taken into account by a mixed discrete-continuum approach, including five water molecules of the first solvation shell and the Polarizable Continuum Model (PCM). The vibronic absorption line-width has finally been simulated at the TD-M052X level by a time dependent method within the harmonic approximation. The resulting absorption spectra are in good agreement with their experimental counterparts, providing useful indications on the use of PCM/TD-DFT based approaches to interpret the spectra of guanine based radicals within DNA.

Details

ISSN :
23670932
Volume :
3
Database :
OpenAIRE
Journal :
ChemPhotoChem
Accession number :
edsair.doi.dedup.....faf118da64ecf85d2fce8c6e70ebbe61