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DisProt 7.0 : a major update of the database of disordered proteins
- Source :
- Nucleic Acids Research, Nucleic Acids Research, 2017, 45 (D1), pp.D219--D227. ⟨10.1093/nar/gkw1056⟩, Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Nucleic Acids Research, Oxford University Press, 2017, 45 (D1), pp.D219--D227. ⟨10.1093/nar/gkw1056⟩, Nucleic acids research, 45 (D1
- Publication Year :
- 2016
-
Abstract
- The Database of Protein Disorder (DisProt, URL: www.disprot.org) has been significantly updated and upgraded since its last major renewal in 2007. The current release holds information on more than 800 entries of IDPs/IDRs, i.e. intrinsically disordered proteins or regions that exist and function without a well-defined three-dimensional structure. We have re-curated previous entries to purge DisProt from conflicting cases, and also upgraded the functional classification scheme to reflect continuous advance in the field in the past 10 years or so. We define IDPs as proteins that are disordered along their entire sequence, i.e. entirely lack structural elements, and IDRs as regions that are at least five consecutive residues without well-defined structure. We base our assessment of disorder strictly on experimental evidence, such as X-ray crystallography and nuclear magnetic resonance (primary techniques) and a broad range of other experimental approaches (secondary techniques). Confident and ambiguous annotations are highlighted separately. DisProt 7.0 presents classified knowledge regarding the experimental characterization and functional annotations of IDPs/IDRs, and is intended to provide an invaluable resource for the research community for a better understanding structural disorder and for developing better computational tools for studying disordered proteins.<br />SCOPUS: ar.j<br />info:eu-repo/semantics/published
- Subjects :
- 0301 basic medicine
Protein Conformation
Classification scheme
[SDV.BC]Life Sciences [q-bio]/Cellular Biology
Computational biology
Biology
Intrinsically disordered proteins
computer.software_genre
Crystallography, X-Ray
03 medical and health sciences
Text mining
Protein structure
Research community
Fluorescence Resonance Energy Transfer
Genetics
Database Issue
Animals
Humans
Databases, Protein
Biological sciences
Nuclear Magnetic Resonance, Biomolecular
ComputingMilieux_MISCELLANEOUS
030102 biochemistry & molecular biology
Database
business.industry
Généralités
Intrinsically Disordered Proteins
030104 developmental biology
Förster resonance energy transfer
Forms and Records Control
Erratum
business
computer
Forecasting
Subjects
Details
- Language :
- English
- ISSN :
- 03051048 and 13624962
- Database :
- OpenAIRE
- Journal :
- Nucleic Acids Research, Nucleic Acids Research, 2017, 45 (D1), pp.D219--D227. ⟨10.1093/nar/gkw1056⟩, Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Nucleic Acids Research, Oxford University Press, 2017, 45 (D1), pp.D219--D227. ⟨10.1093/nar/gkw1056⟩, Nucleic acids research, 45 (D1
- Accession number :
- edsair.doi.dedup.....f9b621eeb5e09105a919fe27cec6b910
- Full Text :
- https://doi.org/10.1093/nar/gkw1056⟩