A previously unknown cyclic alkanolamine and molecular ranking using the pair distribution function

Acta crystallographica / B 77(6), 986 - 995 (2021). doi:10.1107/S2052520621010088
A new six-membered cyclic alkanolamine with chemical formula C$_6$H$_{15}$N$_3$O$_3$ was synthesized by the reaction of glycolaldehyde with gaseous ammonia. The molecular structure, characterized by a hexagonal ring of alternating carbon and nitro��gen atoms with three hy��droxy��methyl groups attached to the carbon atoms, could not be unambiguously determined by elemental analysis and $^1$H/$^{13}$C/$^{15}$N NMR. The molecular structure and conformation were further determined using a combination of vibrational spectroscopy (IR and Raman) and real-space pair distribution function (PDF) analysis. The crystal structure was determined ab initio from laboratory X-ray powder diffraction (XRPD) with orthorhombic space group Ama2 (No. 40) and unit-cell parameters a = 12.1054 (2) ��, b = 13.5537 (2) �� and c = 5.20741 (8) ��. Consistent structure models could be obtained by symmetry-independent PDF and PDF-Rietveld co-refinements. Independent local structure refinements indicate that the most likely deviations from the average structure consist of small tilting and translational distortions of hydrogen-bonded molecular stacks. Thermal analysis (TG/DTA) and temperature-dependent XRPD measurements were also performed to determine the thermal behavior.
Published by Wiley-Blackwell, Oxford [u.a.]