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An arsenal of methods for the experimental characterization of intrinsically disordered proteins – How to choose and combine them?
- Source :
- Archives of Biochemistry and Biophysics, Archives of Biochemistry and Biophysics, Elsevier, 2019, pp.108055. ⟨10.1016/j.abb.2019.07.020⟩, Archives of Biochemistry and Biophysics, 2019, pp.108055. ⟨10.1016/j.abb.2019.07.020⟩
- Publication Year :
- 2019
- Publisher :
- HAL CCSD, 2019.
-
Abstract
- International audience; In this review, we detail the most common experimental approaches to assess and characterize protein intrinsic structural disorder, with the notable exception of NMR and EPR spectroscopy, two ideally suited approaches that will be described in depth in two other reviews within this special issue. We discuss the advantages, the limitations, as well as the caveats of the various methods. We also describe less common and more demanding approaches that enable achieving further insights into the conformational properties of IDPs. Finally, we present recent developments that have enabled assessment of structural disorder in living cells, and discuss the currently available methods to model IDPs as conformational ensembles.
- Subjects :
- 0301 basic medicine
Models, Molecular
Ensemble models
Secondary and tertiary structure content
Computer science
Protein Conformation
Biophysics
Intrinsically disordered proteins
Biochemistry
03 medical and health sciences
Degree of compactne
Degree of compactness
Humans
[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM]
Molecular Biology
Conformational ensembles
030102 biochemistry & molecular biology
Staining and Labeling
[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM]
[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology
BIO/10 - BIOCHIMICA
Characterization (materials science)
[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM]
Intrinsically Disordered Proteins
[SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics
[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM]
030104 developmental biology
Ensemble model
In-vivo assessment of disorder
Hydrodynamics
Mutagenesis, Site-Directed
Experimental assessment of protein disorder
Biological system
Subjects
Details
- Language :
- English
- ISSN :
- 00039861 and 10960384
- Database :
- OpenAIRE
- Journal :
- Archives of Biochemistry and Biophysics, Archives of Biochemistry and Biophysics, Elsevier, 2019, pp.108055. ⟨10.1016/j.abb.2019.07.020⟩, Archives of Biochemistry and Biophysics, 2019, pp.108055. ⟨10.1016/j.abb.2019.07.020⟩
- Accession number :
- edsair.doi.dedup.....f54eb47e3d241a3fd17f05cbaaedcc7d
- Full Text :
- https://doi.org/10.1016/j.abb.2019.07.020⟩