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Microsatellite primers in red bayberry, Myrica rubra (Myricaceae)
- Source :
- American journal of botany. 98(4)
- Publication Year :
- 2011
-
Abstract
- PREMISE OF THE STUDY Microsatellite markers were developed in Myrica rubra to investigate potential hybridization events within or between M. rubra and its closely related species. METHODS AND RESULTS Using an ISSR-suppression PCR method, 12 primer pairs were temporarily developed with GSG(GT)(6) as the primer for enriching microsatellite sequences and the genomic DNA of M. rubra cv. 'Heijing' as template. The average allele number per locus was 4.9 within 26 individuals including two species, M. rubra and M. nana. Three pairs of primers produced species-specific alleles, and the other nine showed polymorphisms among 26 accessions. CONCLUSIONS Results indicated that the ISSR-suppression PCR method is suitable for developing microsatellite markers, especially for this species with little understanding of genomic information. The developed microsatellite markers provide a useful tool for further studies of population structure within or between M. rubra and M. nana or other closely related species.
- Subjects :
- Genetics
Polymorphism, Genetic
biology
DNA, Plant
Population structure
Locus (genetics)
Plant Science
biology.organism_classification
Polymerase Chain Reaction
Myricaceae
Myrica
genomic DNA
Species Specificity
Genetic Loci
Microsatellite
Hybridization, Genetic
Primer (molecular biology)
Allele
Ecology, Evolution, Behavior and Systematics
Myrica rubra
Alleles
Genome, Plant
DNA Primers
Microsatellite Repeats
Subjects
Details
- ISSN :
- 15372197
- Volume :
- 98
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- American journal of botany
- Accession number :
- edsair.doi.dedup.....f444636a687358f32201c2f0e148b525