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Risk stratification by long non‐coding RNAs profiling in COVID‐19 patients
- Source :
- Journal of Cellular and Molecular Medicine
- Publication Year :
- 2021
- Publisher :
- Wiley, 2021.
-
Abstract
- Coronavirus disease 2019 (COVID‐19), caused by severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2), has become a global pandemic worldwide. Long non‐coding RNAs (lncRNAs) are a subclass of endogenous, non‐protein‐coding RNA, which lacks an open reading frame and is more than 200 nucleotides in length. However, the functions for lncRNAs in COVID‐19 have not been unravelled. The present study aimed at identifying the related lncRNAs based on RNA sequencing of peripheral blood mononuclear cells from patients with SARS‐CoV‐2 infection as well as health individuals. Overall, 17 severe, 12 non‐severe patients and 10 healthy controls were enrolled in this study. Firstly, we reported some altered lncRNAs between severe, non‐severe COVID‐19 patients and healthy controls. Next, we developed a 7‐lncRNA panel with a good differential ability between severe and non‐severe COVID‐19 patients using least absolute shrinkage and selection operator regression. Finally, we observed that COVID‐19 is a heterogeneous disease among which severe COVID‐19 patients have two subtypes with similar risk score and immune score based on lncRNA panel using iCluster algorithm. As the roles of lncRNAs in COVID‐19 have not yet been fully identified and understood, our analysis should provide valuable resource and information for the future studies.
- Subjects :
- Male
RNA-Seq
macromolecular substances
Disease
Bioinformatics
Risk Assessment
Severity of Illness Index
Subclass
Transcriptome
lncRNA
COVID‐19
Severity of illness
Humans
Medicine
pulmonary injury
Aged
Aged, 80 and over
Framingham Risk Score
business.industry
Case-control study
COVID-19
RNA
Original Articles
Cell Biology
Middle Aged
Case-Control Studies
RNA‐seq
Molecular Medicine
Original Article
Female
RNA, Long Noncoding
business
transcriptome
Biomarkers
Subjects
Details
- ISSN :
- 15824934 and 15821838
- Volume :
- 25
- Database :
- OpenAIRE
- Journal :
- Journal of Cellular and Molecular Medicine
- Accession number :
- edsair.doi.dedup.....f41a9f8c5a3afcd7fa1e35d07011f2e7
- Full Text :
- https://doi.org/10.1111/jcmm.16444