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Multilingual RECIST classification of radiology reports using supervised learning

Authors :
Mottin, Luc
Goldman, Jean-Philippe
Jäggli, Christoph
Achermann, Rita
Gobeill, Julien
Knafou, Julien
Ehrsam, Julien
Wicky, Alexandre
Gérard, Camille L
Schwenk, Tanja
Charrier, Mélinda
Tsantoulis, Petros
Lovis, Christian
Leichtle, Alexander
Kiessling, Michael K
Michielin, Olivier
Pradervand, Sylvain
Foufi, Vasiliki
Ruch, Patrick
Source :
Mottin, Luc; Goldman, Jean-Philippe; Jäggli, Christoph; Achermann, Rita; Gobeill, Julien; Knafou, Julien; Ehrsam, Julien; Wicky, Alexandre; Gérard, Camille L; Schwenk, Tanja; Charrier, Mélinda; Tsantoulis, Petros; Lovis, Christian; Leichtle, Alexander; Kiessling, Michael K; Michielin, Olivier; Pradervand, Sylvain; Foufi, Vasiliki; Ruch, Patrick (2023). Multilingual RECIST classification of radiology reports using supervised learning. Frontiers in digital health, 5(1195017), p. 1195017. Frontiers Media 10.3389/fdgth.2023.1195017
Publication Year :
2023
Publisher :
Frontiers Media, 2023.

Abstract

OBJECTIVES The objective of this study is the exploration of Artificial Intelligence and Natural Language Processing techniques to support the automatic assignment of the four Response Evaluation Criteria in Solid Tumors (RECIST) scales based on radiology reports. We also aim at evaluating how languages and institutional specificities of Swiss teaching hospitals are likely to affect the quality of the classification in French and German languages. METHODS In our approach, 7 machine learning methods were evaluated to establish a strong baseline. Then, robust models were built, fine-tuned according to the language (French and German), and compared with the expert annotation. RESULTS The best strategies yield average F1-scores of 90% and 86% respectively for the 2-classes (Progressive/Non-progressive) and the 4-classes (Progressive Disease, Stable Disease, Partial Response, Complete Response) RECIST classification tasks. CONCLUSIONS These results are competitive with the manual labeling as measured by Matthew's correlation coefficient and Cohen's Kappa (79% and 76%). On this basis, we confirm the capacity of specific models to generalize on new unseen data and we assess the impact of using Pre-trained Language Models (PLMs) on the accuracy of the classifiers.

Subjects

Subjects :
610 Medicine & health

Details

Language :
English
Database :
OpenAIRE
Journal :
Mottin, Luc; Goldman, Jean-Philippe; J&#228;ggli, Christoph; Achermann, Rita; Gobeill, Julien; Knafou, Julien; Ehrsam, Julien; Wicky, Alexandre; G&#233;rard, Camille L; Schwenk, Tanja; Charrier, M&#233;linda; Tsantoulis, Petros; Lovis, Christian; Leichtle, Alexander; Kiessling, Michael K; Michielin, Olivier; Pradervand, Sylvain; Foufi, Vasiliki; Ruch, Patrick (2023). Multilingual RECIST classification of radiology reports using supervised learning. Frontiers in digital health, 5(1195017), p. 1195017. Frontiers Media 10.3389/fdgth.2023.1195017 <http://dx.doi.org/10.3389/fdgth.2023.1195017>
Accession number :
edsair.doi.dedup.....f33f04a77b138efcecc8b099ca8a0ea6
Full Text :
https://doi.org/10.3389/fdgth.2023.1195017