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A Thermolabile Phospholipase B from Talaromyces marneffei GD-0079: Biochemical Characterization and Structure Dynamics Study
- Source :
- Biomolecules, Volume 10, Issue 2, Biomolecules, Vol 10, Iss 2, p 231 (2020)
- Publication Year :
- 2020
- Publisher :
- MDPI AG, 2020.
-
Abstract
- Phospholipase B (EC 3.1.1.5) are a distinctive group of enzymes that catalyzes the hydrolysis of fatty acids esterified at the sn-1 and sn-2 positions forming free fatty acids and lysophospholipids. The structural information and catalytic mechanism of phospholipase B are still not clear. Herein, we reported a putative phospholipase B (TmPLB1) from Talaromyces marneffei GD-0079 synthesized by genome mining library. The gene (TmPlb1) was expressed and the TmPLB1 was purified using E. coli shuffle T7 expression system. The putative TmPLB1 was purified by affinity chromatography with a yield of 13.5%. The TmPLB1 showed optimum activity at 35 &deg<br />C and pH 7.0. The TmPLB1 showed enzymatic activity using Lecithin (soybean &gt<br />98% pure), and the hydrolysis of TmPLB1 by 31P NMR showed phosphatidylcholine (PC) as a major phospholipid along with lyso-phospholipids (1-LPC and 2-LPC) and some minor phospholipids. The molecular modeling studies indicate that its active site pocket contains Ser125, Asp183 and His215 as the catalytic triad. The structure dynamics and simulations results explained the conformational changes associated with different environmental conditions. This is the first report on biochemical characterization and structure dynamics of TmPLB1 enzyme. The present study could be helpful to utilize TmPLB1 in food industry for the determination of food components containing phosphorus. Additionally, such enzyme could also be useful in Industry for the modifications of phospholipids.
- Subjects :
- food.ingredient
Protein Conformation
lcsh:QR1-502
Phospholipid
Molecular Dynamics Simulation
01 natural sciences
Biochemistry
Lecithin
Article
lcsh:Microbiology
Fungal Proteins
affinity chromatography
03 medical and health sciences
chemistry.chemical_compound
food
Phosphatidylcholine
Enzyme Stability
Catalytic triad
phospholipase B
Thermolabile
Molecular Biology
030304 developmental biology
chemistry.chemical_classification
0303 health sciences
Phospholipase B
biology
010405 organic chemistry
Chemistry
Talaromyces marneffei
Active site
Hydrogen Bonding
0104 chemical sciences
Enzyme
Talaromyces
NMR (nuclear magnetic resonance)
free fatty acids (FFAs)
biology.protein
Thermodynamics
lipids (amino acids, peptides, and proteins)
Lysophospholipase
Subjects
Details
- ISSN :
- 2218273X
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- Biomolecules
- Accession number :
- edsair.doi.dedup.....f31dc2d636034a1590bd7cf44e508cd9