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Predictive Modeling of Tacrolimus Dose Requirement Based on High-Throughput Genetic Screening
- Source :
- American Journal of Transplantation, American Journal of Transplantation, 2017, 17 (4), pp.1008-1019. ⟨10.1111/ajt.14040⟩, American Journal of Transplantation, Wiley, 2017, 17 (4), pp.1008-1019. ⟨10.1111/ajt.14040⟩
- Publication Year :
- 2017
- Publisher :
- Elsevier BV, 2017.
-
Abstract
- International audience; Any biochemical reaction underlying drug metabolism depends on individual gene-drug interactions and on groups of genes interacting together. Based on a high-throughput genetic approach, we sought to identify a set of covariant single-nucleotide polymorphisms predictive of interindividual tacrolimus (Tac) dose requirement variability. Tac blood concentrations (Tac C0 ) of 229 kidney transplant recipients were repeatedly monitored after transplantation over 3 mo. Given the high dimension of the genomic data in comparison to the low number of observations and the high multicolinearity among the variables (gene variants), we developed an original predictive approach that integrates an ensemble variable-selection strategy to reinforce the stability of the variable-selection process and multivariate modeling. Our predictive models explained up to 70% of total variability in Tac C0 per dose with a maximum of 44 gene variants (p-value
- Subjects :
- Genetic Markers
Graft Rejection
0301 basic medicine
Genotype
translational research/science
immunosuppression/immune modulation
Biology
clinical research/practice
Bioinformatics
Polymorphism, Single Nucleotide
030226 pharmacology & pharmacy
Tacrolimus
ABCC8
Cohort Studies
03 medical and health sciences
0302 clinical medicine
genomics
Humans
Immunology and Allergy
genetics
Pharmacology (medical)
Genetic Testing
Gene
Transplantation
Models, Statistical
Transporter
Kidney Transplantation
Transplant Recipients
High-Throughput Screening Assays
3. Good health
immunosuppressive regimens
Molecular network
030104 developmental biology
[SDV.TOX]Life Sciences [q-bio]/Toxicology
biology.protein
Tacrolimus Dose
pharmacology
Immunosuppressive Agents
Drug metabolism
Subjects
Details
- ISSN :
- 16006135 and 16006143
- Volume :
- 17
- Database :
- OpenAIRE
- Journal :
- American Journal of Transplantation
- Accession number :
- edsair.doi.dedup.....f1c1a89a259a49cc4b58a8e4b5d07603
- Full Text :
- https://doi.org/10.1111/ajt.14040