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The complete chloroplast genome sequences of Iris sanguinea donn ex Hornem
- Source :
- Mitochondrial DNA Part A. 28:15-16
- Publication Year :
- 2015
- Publisher :
- Informa UK Limited, 2015.
-
Abstract
- The complete chloroplast genome of Iris sanguinea was sequenced newly in this study. The total chloroplast genome size of I. sanguinea was 152 408 bp, its structure and gene contents were well conserved as typical chloroplast characteristics. Large single copy (LSC) and small single copy (SSC) of 82 340 bp and 18 016 bp, respectively, were separated from a pair of inverted repeats (IRA and IRB) of 26 026 bp. A total of 112 genes, i.e. 78 protein-coding genes, 30 tRNA genes, and four rRNA genes, were encoded in the chloroplast genome of I. sanguinea. Overall GC content of I. sanguinea was 36.83%. Phylogenetic analysis with the reported chloroplast genomes revealed that I. sanguinea is most closely related to I. gatesii.
- Subjects :
- 0301 basic medicine
Chloroplasts
Inverted repeat
Biology
Genome
DNA sequencing
Iridaceae
Open Reading Frames
03 medical and health sciences
RNA, Transfer
Genetics
Genome, Chloroplast
Molecular Biology
Gene
Genome size
Phylogeny
Plant Proteins
DNA, Chloroplast
food and beverages
Iris sanguinea
Sequence Analysis, DNA
Ribosomal RNA
030104 developmental biology
RNA, Ribosomal
GC-content
Microsatellite Repeats
Subjects
Details
- ISSN :
- 24701408 and 24701394
- Volume :
- 28
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA Part A
- Accession number :
- edsair.doi.dedup.....f062a598ab0321e5d6c2d9b894c357df