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A standard protocol for describing individual-based and agent-based models

Authors :
Donald L. DeAngelis
Sami Souissi
Tamara C. Grand
John D. Goss-Custard
Nadja Rüger
Jarl Giske
Espen Strand
Steven F. Railsback
Andreas Huth
Vincent Ginot
Birgit Müller
Eva Rossmanith
Guy Pe'er
Wolf M. Mooij
Christian Jorgensen
Sigrunn Eliassen
Andrew M. Robbins
Finn Bastiansen
Cyril Piou
Geir Huse
Jane Uhd Jepsen
Simone K. Heinz
Uta Berger
Rune Vabø
Ute Visser
Martha M. Robbins
Richard A. Stillman
Volker Grimm
Helmholtz Zentrum für Umweltforschung = Helmholtz Centre for Environmental Research (UFZ)
University of Bremen
University of Bergen (UiB)
Biostatistique et Processus Spatiaux (BioSP)
Institut National de la Recherche Agronomique (INRA)
Department of Biology
University of Washington [Seattle]
Winfrith Technology Centre
Independent
Norwegian Institute of Marine Research
Royal Netherlands Academy of Arts and Sciences (KNAW)
The Hebrew University of Jerusalem (HUJ)
Lang, Railsback & Associates
Partenaires INRAE
Max Planck Institute for Evolutionary Anthropology [Leipzig]
Max-Planck-Gesellschaft
Institute of Biochemistry and Biology
Université des Sciences et Technologies (Lille 1) (USTL)
University of Miami
University of Miami [Coral Gables]
Aquatic Ecology (AqE)
Source :
Ecological Modelling, Ecological Modelling, Elsevier, 2006, 198 (1-2), pp.115-126. ⟨10.1016/j.ecolmodel.2006.04.023⟩, Ecological Modelling, 198(1-2), 115-126. Elsevier B.V.
Publication Year :
2006
Publisher :
Elsevier BV, 2006.

Abstract

Simulation models that describe autonomous individual organisms (individual based models, IBM) or agents (agent-based models, ABM) have become a widely used tool, not only in ecology, but also in many other disciplines dealing with complex systems made up of autonomous entities. However, there is no standard protocol for describing such simulation models, which can make them difficult to understand and to duplicate. This paper presents a proposed standard protocol, ODD, for describing IBMs and ABMs, developed and tested by 28 modellers who cover a wide range of fields within ecology. This protocol consists of three blocks (Overview, Design concepts, and Details), which are subdivided into seven elements: Purpose, State variables and scales, Process overview and scheduling, Design concepts, Initialization, Input, and Submodels. We explain which aspects of a model should be described in each element, and we present an example to illustrate the protocol in use. In addition, 19 examples are available in an Online Appendix. We consider ODD as a first step for establishing a more detailed common format of the description of IBMs and ABMs. Once initiated, the protocol will hopefully evolve as it becomes used by a sufficiently large proportion of modellers.

Details

ISSN :
03043800
Volume :
198
Database :
OpenAIRE
Journal :
Ecological Modelling
Accession number :
edsair.doi.dedup.....ede3599ce62bf8eae276019c477dc70e
Full Text :
https://doi.org/10.1016/j.ecolmodel.2006.04.023